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elene - Elenes Lab NotebookDESCRIPTION
Skip to main content. Elenes Lab Notebook. 10511 SNP tables from de novo sequence of both Vt strains. Set min variant frequency to 60. SNP tables from de novo consensus of BOTH strains 300bp folder under Assemble to Ref. 10-4-11 Vt de novo assembly BLAST. Performed blastP to swissprot DB using Consensus sequences from denovo BOTH 10530seqs greaterthan300bp.fa. This file is the consensus file de novo assembly of both Vt strains. Stats summaries to the gene level for each table. Up the volume of the pri.PARSED CONTENT
The domain elene.wikispaces.com has the following on the web site, "10511 SNP tables from de novo sequence of both Vt strains." I observed that the webpage also said " Set min variant frequency to 60." They also stated " SNP tables from de novo consensus of BOTH strains 300bp folder under Assemble to Ref. 10-4-11 Vt de novo assembly BLAST. Performed blastP to swissprot DB using Consensus sequences from denovo BOTH 10530seqs greaterthan300bp. This file is the consensus file de novo assembly of both Vt strains. Stats summaries to the gene level for each table. Up the volume of the pri."